[1] Lv DY, Duan R, Fan R, Mu H, Liang JR, Xiao M, et al.blaNDMandmcr-1tomcr-5gene distribution characteristics in gut specimens from different regions of China. Antibiotics (Basel) 2021;10(3):233. http://dx.doi.org/10.3390/antibiotics10030233.
[2] Zhou ZM, Alikhan NF, Mohamed K, Fan YL, Agama Study Group, Achtman M. The EnteroBase user’s guide, with case studies onSalmonellatransmissions,Yersinia pestisphylogeny, andEscherichiacore genomic diversity. Genome Res 2020;30(1):138 − 52. http://dx.doi.org/10.1101/gr.251678.119.
[3] Bortolaia V, Kaas RS, Ruppe E, Roberts MC, Schwarz S, Cattoir V, et al. ResFinder 4. 0 for predictions of phenotypes from genotypes. J Antimicrob Chemother 2020;75(12):3491 − 500. http://dx.doi.org/10.1093/jac/dkaa345.
[4] Clermont O, Christenson JK, Denamur E, Gordon DM. The ClermontEscherichia coliphylo-typing method revisited: improvement of specificity and detection of new phylo-groups. Environ Microbiol Rep 2013;5(1):58 − 65. http://dx.doi.org/10.1111/1758-2229.12019.
[5] Le Gall T, Clermont O, Gouriou S, Picard B, Nassif X, Denamur E, et al. Extraintestinal virulence is a coincidental by-product of commensalism in B2 phylogenetic groupEscherichia colistrains. Mol Biol Evol 2007;24(11):2373 − 84. http://dx.doi.org/10.1093/molbev/msm172.
[6] Brons JK, Vink SN, de Vos MGJ, Reuter S, Dobrindt U, van Elsas JD. Fast identification ofEscherichia coliin urinary tract infections using a virulence gene based PCR approach in a novel thermal cycler. J Microbiol Methods 2020;169:105799. http://dx.doi.org/10.1016/j.mimet.2019.105799.
[7] Lin WH, Wang MC, Liu PY, Chen PS, Wen LL, Teng CH, et al.Escherichia coliurinary tract infections: host age-related differences in bacterial virulence factors and antimicrobial susceptibility. J Microbiol Immunol Infect 2022;55(2):249 − 56. http://dx.doi.org/10.1016/j.jmii.2021.04.001.
[8] Bunduki GK, Heinz E, Phiri VS, Noah P, Feasey N, Musaya J. Virulence factors and antimicrobial resistance of uropathogenicEscherichia coli(UPEC) isolated from urinary tract infections: a systematic review and meta-analysis. BMC Infect Dis 2021;21(1):753. http://dx.doi.org/10.1186/s12879-021-06435-7.
[9] Semeniuk H, Church D. Evaluation of the leukocyte esterase and nitrite urine dipstick screening tests for detection of bacteriuria in women with suspected uncomplicated urinary tract infections. J Clin Microbiol 1999;37(9):3051 − 2. http://dx.doi.org/10.1128/jcm.37.9.3051-3052.1999.
[10] Kent AG, Vill AC, Shi QJ, Satlin MJ, Brito IL. Widespread transfer of mobile antibiotic resistance genes within individual gut microbiomes revealed through bacterial Hi-C. Nat Commun 2020;11(1):4379. http://dx.doi.org/10.1038/s41467-020-18164-7.
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